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Activity (RSS)

Monday, August 11 2008
8 dat_to_ascii default output dir was updated
  • bahuvrihi
    • State changed from new to resolved
    • Assigned user set to bahuvrihi
    by bahuvrihi at 3:18 PM
  • bahuvrihi
    bahuvrihi created the ticket at 3:12 PM

    Would be nice if dat_to_ascii could configure the output directory -- with a default of simply replacing the extension of the input file.

    /path/to/file.dat ...
Tuesday, July 22 2008
1 No way to specify tab from command line? was updated
  • bahuvrihi
    • State changed from new to resolved
    • Tag set to align_mod, bug
    by bahuvrihi at 3:01 PM

    This should not be a problem with the &c.string validation block in tap-0.10.0

Thursday, May 22 2008
7 Amanda setup was created
  • bahuvrihi
    bahuvrihi created the ticket at 3:49 PM

    Amanda setup should be tied into one continuous thing. The info script should gather all the information it can, then make a single config file that can be mo...
Sunday, May 04 2008
6 align_mod does not align on same site, different peptide seq was created
  • bahuvrihi
    bahuvrihi created the ticket at 3:54 PM

    The same site may be identified multiple times, but for different peptide sequences (for example in a 1 miss peptide). alignment should filter for unique site...
Saturday, May 03 2008
5 flag row value was created
  • bahuvrihi
    bahuvrihi created the ticket at 3:43 PM

    The value to be put into a flagged row (ex 1,0) should be a configuration

4 flag row name was created
  • bahuvrihi
    bahuvrihi created the ticket at 3:22 PM

    Flag row should be able to specify a name for the modified column.

Thursday, May 01 2008
3 Filtering option for unique sites was created
  • bahuvrihi
    bahuvrihi created the ticket at 1:22 PM

    align_mod should have a filtering options for only printing unique modification sites

2 align_mod should use normal table was created
  • bahuvrihi
    bahuvrihi created the ticket at 11:56 AM

    align_mod uses older, non-standard table parsing

1 No way to specify tab from command line? was created
  • bahuvrihi
    bahuvrihi created the ticket at 11:55 AM

    Not sure if there is any way to specify tabs from command line -- the defaults for the cells should be tab-based as a result.

Tuesday, April 29 2008
Home was edited by bahuvrihi in Hansen Lab at 8:15 PM (+1 more edit)